We are grateful to announce the next Z03 workshop on bulk RNA-seq, CHIp-seq and ATAC-seq analysis and would like to invite all of our SFB members to participate.
Date: Oct 12/13th, 2022
Venue: Goethe University Frankfurt
Maximum capacity: 17 participants
Content:
We will be utilizing the Galaxy workflow to familiarize the participants with basic tools used for analyzing bulk RNA-seq, CHIp-seq and ATAC-seq.
The analysis will include:
– Find differentially expressed genes between conditions
– Quantify expression levels per transcript
– Get familiar with the integrated Genome browser
– Find differences in chromatin accessibility
– Link differential epigenome sites to changes in gene expression
– Determine de novo or using established database which TF motifs are enriched in a set of (differential) peaks.
Registration
Please register via the SFB Office (info@cardiovascular-ncrna.de) with your name, institution and email address. Registration closes when all places are filled.
