Monthly Archives: October 2022

New Publication

Zhang F, Meier AB, Poch CM, Tian Q, Engelhardt S, Sinnecker D, Lipp P, Laugwitz KL, Moretti A, Dorn T (2022) High-throughput optical action potential recordings in hiPSC-derived cardiomyocytes with a genetically encoded voltage indicator in the AAVS1 locus. Frontiers in Cell and Developmental Biology, 10:1038867 View

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New Publication

Garcia-Gonzalez C, Dieterich C, Maroli G, Wiesnet M, Wietelmann A, Li X, Yuan X, Graumann J, Stellos K, Kubin T, Schneider A, Braun T (2022) ADAR1 Prevents Autoinflammatory Processes in the Heart Mediated by IRF7. Circulation Research, 131(7): 580-597. View

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Career Coaching for Women Scientists

Individual hands-on career coaching in November 2022 with Anne Scharf, a female coach who is specialized in career consulting for scientists. She offers a 3-hour coaching session either in German or in English and, of course, in terms of absolute confidentiality.

Possible range of topics:

  • Strategic career planning
  • Project presentation – with video coaching
  • Communication of career goals to team leader and asking for support
  • Leadership questions
  • Conflicts within the team
  • Application training including professorship appointments

The coach would contact you in advance to discuss which topics to focus on.

If you are interested, please contact us: info@cardiovascular-ncrna.de.

SFB Galaxy Workshop

We are grateful to announce the next Z03 workshop on bulk RNA-seq, CHIp-seq and ATAC-seq analysis and would like to invite all of our SFB members to participate.

Date: Oct 12/13th, 2022
Venue: Goethe University Frankfurt
Maximum capacity: 17 participants

Content:
We will be utilizing the Galaxy workflow to familiarize the participants with basic tools used for analyzing bulk RNA-seq, CHIp-seq and ATAC-seq.

The analysis will include:
– Find differentially expressed genes between conditions
– Quantify expression levels per transcript
– Get familiar with the integrated Genome browser
– Find differences in chromatin accessibility
– Link differential epigenome sites to changes in gene expression
– Determine de novo or using established database which TF motifs are enriched in a set of (differential) peaks.

Registration
Please register via the SFB Office (info@cardiovascular-ncrna.de) with your name, institution and email address. Registration closes when all places are filled.